ILSVRC_S.py
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__author__ = 'chunk'
from . import *
from ..mfeat import IntraBlockDiff
from ..mspark import rdd, SC
from pyspark.mllib.regression import LabeledPoint
from ..common import *
import os, sys
from hashlib import md5
import csv
import json
import happybase
from ..mjpeg import *
from ..msteg import *
from ..msteg.steganography import LSB, F3, F4, F5
import numpy as np
from scipy import stats
import tempfile
np.random.seed(sum(map(ord, "whoami")))
package_dir = os.path.dirname(os.path.abspath(__file__))
class DataILSVRC_S(DataDumperBase):
"""
This module is specially for ILSVRC data processing under spark & hbase.
We posit that the DB(e.g. HBase) has only the images data with md5 name as id.
The task is to gennerate info(size,capacity,quality,etc.) and class & chosen tags, and then to perform embedding and finally to calcculate ibd features.
Each step includes reading from & writing to Hbase (though PC).
And each step must have a 'spark' mode option, which means that the operation is performed by spark with reading & wrting through RDDs.
copyright(c) 2015 chunkplus@gmail.com
"""
def __init__(self, base='ILSVRC2013_DET_val', category='Train_1', tablename=None):
DataDumperBase.__init__(self, base, category)
self.base = base
self.category = category
self.dict_data = {}
self.rdd_data = None
if tablename is None:
self.table_name = self.base.strip('/').split('/')[-1]
if self.category != None:
self.table_name += ('-' + self.category)
else:
self.table_name = tablename
self.sparker = SC.Sparker(host='HPC-server', appname='ImageILSVRC-S',
master='spark://HPC-server:7077')
self.steger = F5.F5(sample_key, 1)
def get_table(self):
print "getting table [%s]..." % self.table_name
if self.table != None:
return self.table
if self.connection is None:
c = happybase.Connection('HPC-server')
self.connection = c
tables = self.connection.tables()
if self.table_name not in tables:
families = {'cf_pic': dict(),
'cf_info': dict(max_versions=10),
'cf_tag': dict(),
'cf_feat': dict(),
}
self.connection.create_table(name=self.table_name, families=families)
table = self.connection.table(name=self.table_name)
self.table = table
return table
def delete_table(self, table_name=None, disable=True):
print "deleting table..."
if table_name == None:
table_name = self.table_name
if self.connection is None:
c = happybase.Connection('HPC-server')
self.connection = c
tables = self.connection.tables()
if table_name not in tables:
return False
else:
try:
self.connection.delete_table(table_name, disable)
except:
print 'Exception when deleting table.'
raise
return True
def _get_info(self, img, info_rate=None, tag_chosen=None, tag_class=None):
"""
Tempfile is our friend. (?)
"""
info_rate = info_rate if info_rate != None else 0.0
tag_chosen = tag_chosen if tag_chosen != None else stats.bernoulli.rvs(0.8)
tag_class = tag_class if tag_class != None else 0
try:
tmpf = tempfile.NamedTemporaryFile(suffix='.jpg', mode='w+b')
tmpf.write(img)
tmpf.seek(0)
im = Jpeg(tmpf.name, key=sample_key)
info = [
im.image_width,
im.image_height,
im.image_width * im.image_height,
im.getCapacity(),
im.getQuality(),
info_rate,
tag_chosen,
tag_class
]
return info
except Exception as e:
print e
finally:
tmpf.close()
def _get_feat(self, image, feattype='ibd', **kwargs):
# size = kwargs.get('size', (48, 48))
#
# if feattype == 'hog':
# feater = HOG.FeatHOG(size=size)
if feattype == 'ibd':
feater = IntraBlockDiff.FeatIntraBlockDiff()
else:
raise Exception("Unknown feature type!")
desc = feater.feat(image)
return desc
def _rddparse_data(raw_row):
"""
input: (u'key0',u'cf_feat:hog:[0.056273,...]--%--cf_pic:data:\ufffd\ufffd\...--%--cf_tag:hog:True')
return: ([0.056273,...],1)
In fact we can also use mapValues.
"""
key = raw_row[0]
# if key == '04650c488a2b163ca8a1f52da6022f03.jpg':
# with open('/tmp/hhhh','wb') as f:
# f.write(raw_row[1].decode('unicode-escape')).encode('latin-1')
items = raw_row[1].decode('unicode-escape').encode('latin-1').split('--%--')
data = items[0].split('cf_pic:data:')[-1]
return (key, data)
def _rddparse_all(raw_row):
key = raw_row[0]
items = raw_row[1].decode('unicode-escape').encode('latin-1').split('--%--')
data = [items[0].split('cf_pic:data:')[-1]] + [json.loads(item.split(':')[-1]) for item in items[1:]]
return (key, data)
def _rdd_embed(self, row):
"""
input:
e.g. row =('row1',[1,3400,'hello'])
return:
newrow = ('row2',[34,5400,'embeded'])
"""
items = row[1]
capacity, rate, chosen = items[4], items[6], items[7]
if chosen == 0:
return None
try:
tmpf_src = tempfile.NamedTemporaryFile(suffix='.jpg', mode='w+b')
tmpf_src.write(items[0])
tmpf_src.seek(0)
tmpf_dst = tempfile.NamedTemporaryFile(suffix='.jpg', mode='w+b')
if rate == None:
embed_rate = self.steger.embed_raw_data(tmpf_src.name, os.path.join(package_dir, '../res/toembed'),
tmpf_dst.name)
else:
assert (rate >= 0 and rate < 1)
# print capacity
hidden = np.random.bytes(int(int(capacity) * rate) / 8)
embed_rate = self.steger.embed_raw_data(tmpf_src.name, hidden, tmpf_dst.name, frommem=True)
tmpf_dst.seek(0)
raw = tmpf_dst.read()
index = md5(raw).hexdigest()
return (index + '.jpg', [raw] + self._get_info(raw, embed_rate, 0, 1))
except Exception as e:
print e
raise
finally:
tmpf_src.close()
tmpf_dst.close()
def _extract_data(self, mode='hbase', writeback=False, withdata=True):
"""
Get info barely out of image data.
"""
print "extracting data..."
if mode == 'hbase':
if self.table == None:
self.table = self.get_table()
cols = ['cf_pic:data']
for key, data in self.table.scan(columns=cols):
data = data['cf_pic:data']
self.dict_data[key] = [data] + self._get_info(data)
if not writeback:
return self.dict_data
else:
try:
with self.table.batch(batch_size=5000) as b:
for imgname, imginfo in self.dict_data.items():
b.put(imgname,
{
# 'cf_pic:data': imginfo[0],
'cf_info:width': str(imginfo[1]),
'cf_info:height': str(imginfo[2]),
'cf_info:size': str(imginfo[3]),
'cf_info:capacity': str(imginfo[4]),
'cf_info:quality': str(imginfo[5]),
'cf_info:rate': str(imginfo[6]),
'cf_tag:chosen': str(imginfo[7]),
'cf_tag:class': str(imginfo[8]),
})
except ValueError:
raise
elif mode == 'spark':
if self.sparker == None:
self.sparker = SC.Sparker(host='HPC-server', appname='ImageILSVRC-S',
master='spark://HPC-server:7077')
cols = [
'cf_pic:data',
'cf_info:width',
'cf_info:height',
'cf_info:size',
'cf_info:capacity',
'cf_info:quality',
'cf_info:rate',
'cf_tag:chosen',
'cf_tag:class'
]
# # Debug
# tmp_data = self.sparker.read_hbase(self.table_name, func=rdd.rddparse_data_ILS,
# collect=False)
# # tmp_data = tmp_data.mapValues(lambda data: [data] + rdd.rddinfo_ILS(data))
# print tmp_data.collect()[0][1]
# return
self.rdd_data = self.sparker.read_hbase(self.table_name, func=rdd.rddparse_data_ILS,
collect=False).mapValues(
lambda data: [data] + rdd.rddinfo_ILS(data))
if not writeback:
return self.rdd_data
else:
self.sparker.write_hbase(self.table_name, self.rdd_data, fromrdd=True, columns=cols,
withdata=withdata)
elif mode == 'analysis':
if self.sparker == None:
self.sparker = SC.Sparker(host='HPC-server', appname='ImageILSVRC-S',
master='spark://HPC-server:7077')
cols = [
'cf_pic:data',
]
# # Debug
# tmp_data = self.sparker.read_hbase(self.table_name, func=rdd.rddparse_data_ILS,
# collect=False)
# # tmp_data = tmp_data.mapValues(lambda data: [data] + rdd.rddinfo_ILS(data))
# print tmp_data.collect()[0][1]
# return
self.rdd_data = self.sparker.read_hbase(self.table_name, func=rdd.rddparse_data_ILS,
collect=False).mapValues(
lambda data: [data])
if not writeback:
return self.rdd_data
else:
self.sparker.write_hbase(self.table_name, self.rdd_data, fromrdd=True, columns=cols,
withdata=withdata)
else:
raise Exception("Unknown mode!")
def _embed_data(self, mode='hbase', rate=None, readforward=False, writeback=False, withdata=True):
print "embedding data..."
if mode == 'hbase':
if self.table == None:
self.table = self.get_table()
if readforward:
self.dict_data = {}
cols = [
'cf_pic:data',
'cf_info:width',
'cf_info:height',
'cf_info:size',
'cf_info:capacity',
'cf_info:quality',
'cf_info:rate',
'cf_tag:chosen',
'cf_tag:class'
]
for key, data in self.table.scan(columns=cols):
data = [data[k] for k in cols]
self.dict_data[key] = data
dict_data_ext = {}
for imgname, imgdata in self.dict_data.items():
capacity, chosen = int(imgdata[4]), int(imgdata[7])
if chosen == 0:
continue
try:
tmpf_src = tempfile.NamedTemporaryFile(suffix='.jpg', mode='w+b')
tmpf_src.write(imgdata[0])
tmpf_src.seek(0)
tmpf_dst = tempfile.NamedTemporaryFile(suffix='.jpg', mode='w+b')
if rate == None:
embed_rate = self.steger.embed_raw_data(tmpf_src.name,
os.path.join(package_dir, '../res/toembed'),
tmpf_dst.name)
else:
assert (rate >= 0 and rate < 1)
# print capacity
hidden = np.random.bytes(int(capacity * rate) / 8)
embed_rate = self.steger.embed_raw_data(tmpf_src.name, hidden, tmpf_dst.name, frommem=True)
tmpf_dst.seek(0)
raw = tmpf_dst.read()
index = md5(raw).hexdigest()
dict_data_ext[index + '.jpg'] = [raw] + self._get_info(raw, embed_rate, 0, 1)
except Exception as e:
print e
raise
finally:
tmpf_src.close()
tmpf_dst.close()
self.dict_data.update(dict_data_ext)
if not writeback:
return self.dict_data
else:
try:
with self.table.batch(batch_size=5000) as b:
for imgname, imginfo in dict_data_ext.items():
b.put(imgname,
{
'cf_pic:data': imginfo[0],
'cf_info:width': str(imginfo[1]),
'cf_info:height': str(imginfo[2]),
'cf_info:size': str(imginfo[3]),
'cf_info:capacity': str(imginfo[4]),
'cf_info:quality': str(imginfo[5]),
'cf_info:rate': str(imginfo[6]),
'cf_tag:chosen': str(imginfo[7]),
'cf_tag:class': str(imginfo[8]),
})
except ValueError:
raise
elif mode == 'spark':
if self.sparker == None:
self.sparker = SC.Sparker(host='HPC-server', appname='ImageILSVRC-S',
master='spark://HPC-server:7077')
cols = [
'cf_pic:data',
'cf_info:width',
'cf_info:height',
'cf_info:size',
'cf_info:capacity',
'cf_info:quality',
'cf_info:rate',
'cf_tag:chosen',
'cf_tag:class'
]
if readforward:
self.rdd_data = self.sparker.read_hbase(self.table_name, func=rdd.rddparse_all_ILS, collect=False)
# rdd_data_ext = self.rdd_data.map(lambda x: rdd.rddembed_ILS(x, rate=rate)).filter(lambda x: x != None)
# self.rdd_data = self.rdd_data.union(rdd_data_ext)
self.rdd_data = self.rdd_data.flatMap(lambda x: rdd.rddembed_ILS_EXT(x, rate=rate))
if not writeback:
return self.rdd_data
else:
self.sparker.write_hbase(self.table_name, self.rdd_data, fromrdd=True, columns=cols,
withdata=withdata)
else:
raise Exception("Unknown mode!")
def _extract_feat(self, mode='hbase', feattype='ibd', readforward=False, writeback=False, withdata=False):
print "extracting feat..."
if mode == 'hbase':
if self.table == None:
self.table = self.get_table()
if readforward:
self.dict_data = {}
cols = [
'cf_pic:data',
'cf_info:width',
'cf_info:height',
'cf_info:size',
'cf_info:capacity',
'cf_info:quality',
'cf_info:rate',
'cf_tag:chosen',
'cf_tag:class'
]
for key, data in self.table.scan(columns=cols):
data = [data[k] for k in cols]
self.dict_data[key] = data
for imgname, imgdata in self.dict_data.items():
try:
tmpf_src = tempfile.NamedTemporaryFile(suffix='.jpg', mode='w+b')
tmpf_src.write(imgdata[0])
tmpf_src.seek(0)
desc = json.dumps(self._get_feat(tmpf_src.name, feattype=feattype).tolist())
self.dict_data[imgname].append(desc)
except Exception as e:
print e
raise
finally:
tmpf_src.close()
if not writeback:
return self.dict_data
else:
try:
with self.table.batch(batch_size=5000) as b:
for imgname, imginfo in self.dict_data.items():
b.put(imgname,
{
'cf_pic:data': imginfo[0],
'cf_info:width': str(imginfo[1]),
'cf_info:height': str(imginfo[2]),
'cf_info:size': str(imginfo[3]),
'cf_info:capacity': str(imginfo[4]),
'cf_info:quality': str(imginfo[5]),
'cf_info:rate': str(imginfo[6]),
'cf_tag:chosen': str(imginfo[7]),
'cf_tag:class': str(imginfo[8]),
'cf_feat:' + feattype: imginfo[9],
})
except ValueError:
raise
elif mode == 'spark':
if self.sparker == None:
self.sparker = SC.Sparker(host='HPC-server', appname='ImageILSVRC-S',
master='spark://HPC-server:7077')
cols = [
'cf_pic:data',
'cf_info:width',
'cf_info:height',
'cf_info:size',
'cf_info:capacity',
'cf_info:quality',
'cf_info:rate',
'cf_tag:chosen',
'cf_tag:class',
'cf_feat:' + feattype,
]
if readforward:
self.rdd_data = self.sparker.read_hbase(self.table_name, func=rdd.rddparse_all_ILS, collect=False)
self.rdd_data = self.rdd_data.mapValues(lambda items: rdd.rddfeat_ILS(items, feattype))
# print self.rdd_data.collect()[0]
# return
if not writeback:
return self.rdd_data
else:
print "writing back..."
self.sparker.write_hbase(self.table_name, self.rdd_data, fromrdd=True, columns=cols,
withdata=withdata)
else:
raise Exception("Unknown mode!")
def _analysis(self, mode='analysis', feattype='ibd', readforward=False, writeback=True, withdata=False):
if mode == 'analysis':
if self.sparker == None:
self.sparker = SC.Sparker(host='HPC-server', appname='ImageILSVRC-S',
master='spark://HPC-server:7077')
cols = [
'cf_pic:data',
'cf_tag:class',
]
if readforward:
self.rdd_data = self.sparker.read_hbase(self.table_name, func=rdd.rddparse_all_ILS, collect=False)
self.rdd_data = self.rdd_data.mapValues(lambda items: rdd.rddanalysis_ILS(items))
# print self.rdd_data.collect()[0]
# return
if not writeback:
return self.rdd_data
else:
print "writing back..."
self.sparker.write_hbase(self.table_name, self.rdd_data, fromrdd=True, columns=cols,
withdata=withdata)
else:
raise Exception("Unknown mode!")
def format(self):
print "formatting..."
self._extract_data(mode='hbase', writeback=False)
self._embed_data(mode='hbase', rate=0.1, readforward=False, writeback=False)
self._extract_feat(mode='hbase', feattype='ibd', readforward=False, writeback=True)
def load_data(self, mode='hbase', feattype='ibd', tagtype='class', collect=False):
print "loading data..."
INDEX = []
X = []
Y = []
if mode == "local":
dict_dataset = {}
if feattype == 'coef': # raw
with open(self.list_file, 'rb') as tsvfile:
tsvfile = csv.reader(tsvfile, delimiter='\t')
for line in tsvfile:
hash = line[0]
tag = line[-1]
image = os.path.join(self.img_dir, hash[:3], hash[3:] + '.jpg')
if image:
im = Jpeg(image, key=sample_key)
dict_dataset[hash] = (tag, im.getCoefMatrix(channel='Y'))
for tag, feat in dict_dataset.values():
feat.ravel()[[i * 304 + j for i in range(0, 304, 8) for j in range(0, 304, 8)]] = 0
X.append(feat.tolist())
Y.append(int(tag))
else:
with open(self.list_file, 'rb') as tsvfile:
tsvfile = csv.reader(tsvfile, delimiter='\t')
for line in tsvfile:
hash = line[0]
tag = line[-1]
path_feat = os.path.join(self.feat_dir, hash[:3], hash[3:] + '.' + feattype)
if path_feat:
with open(path_feat, 'rb') as featfile:
dict_dataset[hash] = (tag, json.loads(featfile.read()))
for tag, feat in dict_dataset.values():
# X.append([item for sublist in feat for subsublist in sublist for item in subsublist])
X.append(np.array(feat).ravel().tolist())
Y.append(int(tag))
elif mode == "hbase":
if self.table == None:
self.table = self.get_table()
col_feat, col_tag = 'cf_feat:' + feattype, 'cf_tag:' + tagtype
for key, data in self.table.scan(columns=[col_feat, col_tag]):
# X.append(
# [item for sublist in json.loads(data[col_feat]) for subsublist in sublist for item in subsublist])
X.append(np.array(json.loads(data[col_feat])).ravel().tolist())
Y.append(int(data[col_tag]))
elif mode == "spark" or mode == "cluster":
if self.sparker == None:
self.sparker = SC.Sparker(host='HPC-server', appname='ImageILSVRC-S',
master='spark://HPC-server:7077')
rdd_dataset = self.sparker.read_hbase(self.table_name, func=rdd.rddparse_dataset_ILS, collect=False)
if not collect:
rdd_dataset = rdd_dataset.map(lambda x: LabeledPoint(x[0], x[1]))
return rdd_dataset
for tag, feat in rdd_dataset.collect():
X.append(feat)
Y.append(tag)
else:
raise Exception("Unknown mode!")
return X, Y